RNA–Protein interactions for RNA: ENST00000418778.1

RIOK3P1-201, Transcript of RIO kinase 3 pseudogene 1, humanhuman

BASIC

Gene RIOK3P1, Length 1,528 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3P1-201ENST00000418778 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
RIOK3P1-201ENST00000418778 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
RIOK3P1-201ENST00000418778 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
RIOK3P1-201ENST00000418778 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
RIOK3P1-201ENST00000418778 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
RIOK3P1-201ENST00000418778 FOXD1Q16676 465 aa18.02■□□□□ 0.47
RIOK3P1-201ENST00000418778 MSH5O43196 834 aa17.16■□□□□ 0.34
RIOK3P1-201ENST00000418778 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
RIOK3P1-201ENST00000418778 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
RIOK3P1-201ENST00000418778 ADRA2BP18089 450 aa16.03■□□□□ 0.16
RIOK3P1-201ENST00000418778 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.11
RIOK3P1-201ENST00000418778 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
RIOK3P1-201ENST00000418778 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
RIOK3P1-201ENST00000418778 MAPK8IP2Q13387 824 aaPredicted RBP15.02□□□□□ -0.01
RIOK3P1-201ENST00000418778 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
RIOK3P1-201ENST00000418778 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
RIOK3P1-201ENST00000418778 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
RIOK3P1-201ENST00000418778 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
RIOK3P1-201ENST00000418778 POTEHQ6S545 545 aa14.19□□□□□ -0.14
RIOK3P1-201ENST00000418778 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
RIOK3P1-201ENST00000418778 DNAJC5BQ9UF47 199 aa13.83□□□□□ -0.2
RIOK3P1-201ENST00000418778 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
RIOK3P1-201ENST00000418778 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
RIOK3P1-201ENST00000418778 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
RIOK3P1-201ENST00000418778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
RIOK3P1-201ENST00000418778 DSG3P32926 999 aa13.36□□□□□ -0.27
RIOK3P1-201ENST00000418778 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
RIOK3P1-201ENST00000418778 CAPN15O75808 1086 aa13.18□□□□□ -0.3
RIOK3P1-201ENST00000418778 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
RIOK3P1-201ENST00000418778 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
RIOK3P1-201ENST00000418778 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
RIOK3P1-201ENST00000418778 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
RIOK3P1-201ENST00000418778 ABCB7O75027 752 aa12.83□□□□□ -0.36
RIOK3P1-201ENST00000418778 KCNA4P22459 653 aa12.83□□□□□ -0.36
RIOK3P1-201ENST00000418778 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
RIOK3P1-201ENST00000418778 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
RIOK3P1-201ENST00000418778 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.38
RIOK3P1-201ENST00000418778 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
RIOK3P1-201ENST00000418778 APLP2Q06481 763 aa12.55□□□□□ -0.4
RIOK3P1-201ENST00000418778 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
RIOK3P1-201ENST00000418778 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
RIOK3P1-201ENST00000418778 HAX1O00165 279 aa12.34□□□□□ -0.43
RIOK3P1-201ENST00000418778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.33□□□□□ -0.44
RIOK3P1-201ENST00000418778 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
RIOK3P1-201ENST00000418778 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
RIOK3P1-201ENST00000418778 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
RIOK3P1-201ENST00000418778 POLA2Q14181 598 aa12.21□□□□□ -0.46
RIOK3P1-201ENST00000418778 EVX2Q03828 476 aa12.2□□□□□ -0.46
RIOK3P1-201ENST00000418778 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
RIOK3P1-201ENST00000418778 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
RIOK3P1-201ENST00000418778 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
RIOK3P1-201ENST00000418778 LHX8Q68G74 356 aa12.06□□□□□ -0.48
RIOK3P1-201ENST00000418778 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
RIOK3P1-201ENST00000418778 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
RIOK3P1-201ENST00000418778 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
RIOK3P1-201ENST00000418778 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
RIOK3P1-201ENST00000418778 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
RIOK3P1-201ENST00000418778 GABBR2O75899 941 aa11.82□□□□□ -0.52
RIOK3P1-201ENST00000418778 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
RIOK3P1-201ENST00000418778 ZBTB22O15209 634 aa11.79□□□□□ -0.52
RIOK3P1-201ENST00000418778 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
RIOK3P1-201ENST00000418778 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
RIOK3P1-201ENST00000418778 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.55
RIOK3P1-201ENST00000418778 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.55
RIOK3P1-201ENST00000418778 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
RIOK3P1-201ENST00000418778 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
RIOK3P1-201ENST00000418778 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
RIOK3P1-201ENST00000418778 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
RIOK3P1-201ENST00000418778 SPDYE1Q8NFV5 336 aaPredicted RBP11.45□□□□□ -0.58
RIOK3P1-201ENST00000418778 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
RIOK3P1-201ENST00000418778 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
RIOK3P1-201ENST00000418778 SPDYE2Q495Y8 402 aa11.43□□□□□ -0.58
RIOK3P1-201ENST00000418778 POTEMA6NI47 508 aa11.4□□□□□ -0.58
RIOK3P1-201ENST00000418778 CHADLQ6NUI6 762 aa11.4□□□□□ -0.59
RIOK3P1-201ENST00000418778 POTEGQ6S5H5 508 aa11.34□□□□□ -0.59
RIOK3P1-201ENST00000418778 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
RIOK3P1-201ENST00000418778 CD44P16070 742 aaKnown RBP11.28□□□□□ -0.6
RIOK3P1-201ENST00000418778 DCBLD2Q96PD2 775 aa11.27□□□□□ -0.61
RIOK3P1-201ENST00000418778 CLCN6P51797 869 aa11.26□□□□□ -0.61
RIOK3P1-201ENST00000418778 PCDH10Q9P2E7 1040 aa11.23□□□□□ -0.61
RIOK3P1-201ENST00000418778 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
RIOK3P1-201ENST00000418778 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
RIOK3P1-201ENST00000418778 FBLN2P98095 1184 aa11.17□□□□□ -0.62
RIOK3P1-201ENST00000418778 PRR29P0C7W0 189 aa11.15□□□□□ -0.62
RIOK3P1-201ENST00000418778 ZNF692Q9BU19 519 aaPredicted RBP11.14□□□□□ -0.63
RIOK3P1-201ENST00000418778 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
RIOK3P1-201ENST00000418778 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
RIOK3P1-201ENST00000418778 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
RIOK3P1-201ENST00000418778 GALR2O43603 387 aaPredicted RBP11.01□□□□□ -0.65
RIOK3P1-201ENST00000418778 LCE2DQ5TA82 110 aaPredicted RBP11□□□□□ -0.65
RIOK3P1-201ENST00000418778 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
RIOK3P1-201ENST00000418778 PABPN1Q86U42 306 aaKnown RBP eCLIP10.96□□□□□ -0.65
RIOK3P1-201ENST00000418778 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
RIOK3P1-201ENST00000418778 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
RIOK3P1-201ENST00000418778 FAM163AQ96GL9 167 aaPredicted RBP10.87□□□□□ -0.67
RIOK3P1-201ENST00000418778 METRNQ9UJH8 293 aa10.79□□□□□ -0.68
RIOK3P1-201ENST00000418778 MAMSTRQ6ZN01 415 aa10.79□□□□□ -0.68
RIOK3P1-201ENST00000418778 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
RIOK3P1-201ENST00000418778 CDAN1Q8IWY9 1227 aa10.74□□□□□ -0.69
RIOK3P1-201ENST00000418778 C7P10643 843 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms