Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
TRIM55Q9BYV6 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM55Q9BYV6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM55Q9BYV6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 RNU6-660P-201ENST00000364566 109 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 MRPS6P2-201ENST00000381143 370 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 EI24P3-201ENST00000399046 1062 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 MTCO1P19-201ENST00000443487 500 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 RPL36AP33-201ENST00000450395 310 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 ARPC3P2-201ENST00000457786 533 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC018638.3-201ENST00000461273 132 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC013828.1-201ENST00000481845 158 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 RN7SL284P-201ENST00000498823 275 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 ST13P12-201ENST00000508958 1094 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 ARL2BPP5-201ENST00000523141 481 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC006362.1-201ENST00000567392 174 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 RN7SL753P-201ENST00000581238 290 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC020916.2-201ENST00000591242 360 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC004805.3-201ENST00000603178 310 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC083899.3-201ENST00000603413 594 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC124916.2-201ENST00000604416 224 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AP000254.1-201ENST00000609934 520 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 MIR6862-1-201ENST00000613016 70 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 MIR6862-2-201ENST00000614755 70 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 MIR7159-201ENST00000620587 66 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC009878.1-201ENST00000621819 340 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AL356266.1-201ENST00000623311 483 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC084035.1-201ENST00000634543 607 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 MTND5P24-201ENST00000438892 1767 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 LINC02019-201ENST00000608605 2060 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 AC239868.2-201ENST00000564237 4527 ntBASIC6.13□□□□□ -1.43
TRIM55Q9BYV6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 RPL21P132-201ENST00000331267 462 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 RN7SKP142-201ENST00000411236 328 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 NPM1P40-201ENST00000412758 733 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AL035422.1-201ENST00000414193 397 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 RPL6P29-201ENST00000414863 865 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC099336.2-201ENST00000422457 254 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 COX6CP2-201ENST00000444980 225 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC099560.2-201ENST00000457554 255 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC073594.1-201ENST00000462065 364 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 TRBV5-2-201ENST00000489095 273 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 OR4G11P-201ENST00000492842 939 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 KLRA1P-201ENST00000503499 986 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms