Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 SHROOM2-202ENST00000418909 4615 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PCDHGB6-202ENST00000616430 4601 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 LINC01140-206ENST00000484933 3368 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 EPB41L2-224ENST00000530481 3914 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 KIF3B-201ENST00000375712 6103 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 ACSL6-204ENST00000379244 2658 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 ELP4-210ENST00000638482 3084 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 EFL1-202ENST00000359445 3470 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL592164.1-201ENST00000562814 1976 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC092279.1-202ENST00000597683 1966 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 BCL6B-201ENST00000293805 3555 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RABGEF1-208ENST00000510829 3553 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 SLC7A3-201ENST00000298085 2235 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 BCOR-204ENST00000378463 2230 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC011453.1-201ENST00000597619 2239 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PKD1L2-202ENST00000337114 3427 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PSENEN-201ENST00000222266 603 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 FLT3-201ENST00000241453 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNA5SP452-201ENST00000363004 119 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 SNORD115-14-201ENST00000363090 81 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 SNORD115-31-201ENST00000365318 82 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 Y_RNA.379-201ENST00000365653 102 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 MIR544A-201ENST00000384855 91 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNA5SP496-201ENST00000391240 109 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL627390.1-201ENST00000396055 340 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 SNORA36B-201ENST00000410438 131 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC245452.3-201ENST00000413294 162 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL671883.1-201ENST00000421191 306 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 HBBP1-201ENST00000433329 439 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL161932.1-201ENST00000437408 146 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL929410.2-201ENST00000451170 189 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RN7SL757P-201ENST00000466709 301 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC100832.1-201ENST00000471945 383 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PFN1P9-201ENST00000475753 433 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC105265.1-201ENST00000479379 179 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC109481.1-201ENST00000509173 282 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-1198P-201ENST00000516904 67 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNA5SP230-201ENST00000517039 122 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-894P-201ENST00000517094 105 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC022695.1-201ENST00000522089 237 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 IGHV7-27-201ENST00000522512 330 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC138466.2-201ENST00000540993 304 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 FAHD2P1-201ENST00000546381 939 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC087164.1-201ENST00000577847 513 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 NOS2P4-201ENST00000582696 205 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC107294.3-201ENST00000609211 526 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 HIST1H4G-201ENST00000611444 297 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 BSNDP1-201ENST00000613026 367 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RN7SL796P-201ENST00000613991 291 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 MIR6731-201ENST00000614863 72 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 RN7SL820P-201ENST00000616437 299 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC211433.3-201ENST00000623770 375 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 LINC01835-203ENST00000639800 567 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 M1AP-202ENST00000409585 2457 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 BTN2A3P-203ENST00000465856 2483 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 TTC27-201ENST00000317907 2876 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 INSC-202ENST00000379556 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 HPS4-202ENST00000398145 4497 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 KY-201ENST00000423778 2345 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 DOCK8-202ENST00000382331 1922 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 JADE1-213ENST00000610919 5644 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 SNX19P1-201ENST00000444901 2981 ntBASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 MIP-201ENST00000257979 2599 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 HIF3A-205ENST00000377670 5852 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP4-9Q9BYQ8 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms