Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.36□□□□□ -1.71
VSX2P58304 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.35□□□□□ -1.71
VSX2P58304 AL137100.1-201ENST00000556703 1620 ntBASIC4.35□□□□□ -1.71
VSX2P58304 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.35□□□□□ -1.71
VSX2P58304 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VSX2P58304 RNU1-94P-201ENST00000362627 173 ntBASIC4.35□□□□□ -1.71
VSX2P58304 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.35□□□□□ -1.71
VSX2P58304 MIR129-1-201ENST00000384972 72 ntBASIC4.35□□□□□ -1.71
VSX2P58304 AC073136.2-201ENST00000417282 849 ntBASIC4.35□□□□□ -1.71
VSX2P58304 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.35□□□□□ -1.71
VSX2P58304 MORF4L1P4-201ENST00000450245 976 ntBASIC4.35□□□□□ -1.71
VSX2P58304 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.35□□□□□ -1.71
VSX2P58304 MTCYBP14-201ENST00000457471 715 ntBASIC4.35□□□□□ -1.71
VSX2P58304 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.35□□□□□ -1.71
VSX2P58304 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.35□□□□□ -1.71
VSX2P58304 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.35□□□□□ -1.71
VSX2P58304 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.35□□□□□ -1.71
VSX2P58304 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.35□□□□□ -1.71
VSX2P58304 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.35□□□□□ -1.71
VSX2P58304 AC015912.2-201ENST00000571053 181 ntBASIC4.35□□□□□ -1.71
VSX2P58304 AP005119.2-201ENST00000579735 1105 ntBASIC4.35□□□□□ -1.71
VSX2P58304 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.35□□□□□ -1.71
VSX2P58304 AC010615.3-201ENST00000597319 394 ntBASIC4.35□□□□□ -1.71
VSX2P58304 AC005520.3-201ENST00000602874 370 ntBASIC4.35□□□□□ -1.71
VSX2P58304 AC105105.5-201ENST00000622635 1294 ntBASIC4.35□□□□□ -1.71
VSX2P58304 MIR6810-201ENST00000622701 70 ntBASIC4.35□□□□□ -1.71
VSX2P58304 AC079298.2-201ENST00000623885 459 ntBASIC4.35□□□□□ -1.71
VSX2P58304 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.35□□□□□ -1.71
VSX2P58304 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.35□□□□□ -1.71
VSX2P58304 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VSX2P58304 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VSX2P58304 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
VSX2P58304 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.34□□□□□ -1.71
VSX2P58304 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VSX2P58304 AC107027.3-201ENST00000565095 3473 ntBASIC4.34□□□□□ -1.71
VSX2P58304 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VSX2P58304 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.34□□□□□ -1.71
VSX2P58304 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VSX2P58304 IGKV7-3-201ENST00000357453 298 ntBASIC4.34□□□□□ -1.71
VSX2P58304 SNORD96B-201ENST00000386148 79 ntBASIC4.34□□□□□ -1.71
VSX2P58304 OR51A6P-201ENST00000418680 1004 ntBASIC4.34□□□□□ -1.71
VSX2P58304 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.34□□□□□ -1.71
VSX2P58304 RPL7AP25-201ENST00000423357 805 ntBASIC4.34□□□□□ -1.71
VSX2P58304 RPL21P43-201ENST00000425440 472 ntBASIC4.34□□□□□ -1.71
VSX2P58304 NDUFA5P1-201ENST00000433858 341 ntBASIC4.34□□□□□ -1.71
VSX2P58304 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.34□□□□□ -1.71
VSX2P58304 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.34□□□□□ -1.71
VSX2P58304 PTMAP3-201ENST00000447474 330 ntBASIC4.34□□□□□ -1.71
VSX2P58304 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.34□□□□□ -1.71
VSX2P58304 RPL21P126-201ENST00000470049 478 ntBASIC4.34□□□□□ -1.71
VSX2P58304 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.34□□□□□ -1.71
VSX2P58304 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.34□□□□□ -1.71
VSX2P58304 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.34□□□□□ -1.71
VSX2P58304 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.34□□□□□ -1.71
VSX2P58304 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.34□□□□□ -1.71
VSX2P58304 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.34□□□□□ -1.71
VSX2P58304 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VSX2P58304 AC008782.1-201ENST00000603386 430 ntBASIC4.34□□□□□ -1.71
VSX2P58304 IMMP1LP1-201ENST00000605170 488 ntBASIC4.34□□□□□ -1.71
VSX2P58304 COX6CP4-201ENST00000605798 228 ntBASIC4.34□□□□□ -1.71
VSX2P58304 MIR378J-201ENST00000611988 109 ntBASIC4.34□□□□□ -1.71
VSX2P58304 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.34□□□□□ -1.71
VSX2P58304 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VSX2P58304 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VSX2P58304 RAD17P1-201ENST00000418130 2042 ntBASIC4.34□□□□□ -1.71
VSX2P58304 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VSX2P58304 OR56B2P-202ENST00000641377 2453 ntBASIC4.34□□□□□ -1.72
VSX2P58304 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
VSX2P58304 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VSX2P58304 AC006971.1-201ENST00000407916 4486 ntBASIC4.34□□□□□ -1.72
VSX2P58304 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VSX2P58304 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VSX2P58304 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VSX2P58304 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VSX2P58304 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VSX2P58304 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.33□□□□□ -1.72
VSX2P58304 OR56B2P-201ENST00000317102 954 ntBASIC4.33□□□□□ -1.72
VSX2P58304 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VSX2P58304 SDHCP2-201ENST00000398565 501 ntBASIC4.33□□□□□ -1.72
VSX2P58304 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.33□□□□□ -1.72
VSX2P58304 RAB28P1-201ENST00000411517 641 ntBASIC4.33□□□□□ -1.72
VSX2P58304 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.33□□□□□ -1.72
VSX2P58304 RPL12P28-201ENST00000430852 489 ntBASIC4.33□□□□□ -1.72
VSX2P58304 ELOCP3-201ENST00000439303 348 ntBASIC4.33□□□□□ -1.72
VSX2P58304 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.33□□□□□ -1.72
VSX2P58304 AC013356.1-201ENST00000489027 564 ntBASIC4.33□□□□□ -1.72
VSX2P58304 DEFB109F-201ENST00000491870 277 ntBASIC4.33□□□□□ -1.72
VSX2P58304 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.33□□□□□ -1.72
VSX2P58304 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.33□□□□□ -1.72
VSX2P58304 SNORD116-30-201ENST00000516468 85 ntBASIC4.33□□□□□ -1.72
VSX2P58304 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms