Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL807761.1-201ENST00000417622 171 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC048351.1-201ENST00000420064 602 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN18P56856 AC073464.3-201ENST00000422564 712 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 CKS1BP6-201ENST00000424932 240 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 MTCYBP29-201ENST00000436327 1006 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC004938.1-201ENST00000438468 308 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 GTF3AP5-201ENST00000442645 697 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC090142.1-201ENST00000465776 462 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 RN7SL459P-201ENST00000481078 302 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC093720.1-201ENST00000505681 714 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC111000.3-201ENST00000508057 576 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN18P56856 RNA5SP464-201ENST00000516251 108 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN18P56856 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN18P56856 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN18P56856 PSMA6P4-201ENST00000603247 718 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC008745.1-201ENST00000604064 271 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.2□□□□□ -1.74
CLDN18P56856 AC015914.2-201ENST00000618167 288 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC004232.3-201ENST00000622977 525 ntBASIC4.2□□□□□ -1.74
CLDN18P56856 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN18P56856 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN18P56856 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN18P56856 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN18P56856 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN18P56856 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN18P56856 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLDN18P56856 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLDN18P56856 ATP5F1P2-201ENST00000398143 760 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 AP000580.1-201ENST00000404439 358 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 RN7SKP222-201ENST00000410651 315 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 CYCSP10-201ENST00000417973 294 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 RHEBP2-201ENST00000450289 600 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 FCF1P7-201ENST00000451185 558 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 OR52A4P-201ENST00000472867 958 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 AC006463.2-201ENST00000473326 348 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN18P56856 MTND4LP2-201ENST00000502312 285 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN18P56856 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN18P56856 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN18P56856 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN18P56856 RN7SKP92-201ENST00000517266 244 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN18P56856 SMARCE1P4-201ENST00000523647 241 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
CLDN18P56856 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN18P56856 AC068790.4-201ENST00000602474 263 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 AC138473.1-201ENST00000605717 526 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 AC022106.2-201ENST00000620114 757 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 AL023881.1-201ENST00000621088 301 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 AP003497.2-201ENST00000624220 967 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 U3.53-201ENST00000628922 216 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN18P56856 PHKBP1-201ENST00000450951 1951 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CLDN18P56856 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 CASC19-206ENST00000641028 1430 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CLDN18P56856 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 ZNF137P-201ENST00000456718 1920 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 AL136164.3-201ENST00000624429 3978 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN18P56856 AL445487.1-201ENST00000415694 1580 ntBASIC4.19□□□□□ -1.74
CLDN18P56856 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
CLDN18P56856 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN18P56856 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN18P56856 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN18P56856 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN18P56856 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
CLDN18P56856 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN18P56856 LINC01109-201ENST00000603837 3081 ntBASIC4.18□□□□□ -1.74
CLDN18P56856 AC010329.2-201ENST00000595195 2737 ntBASIC4.18□□□□□ -1.74
CLDN18P56856 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN18P56856 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN18P56856 AL031119.1-201ENST00000404707 1879 ntBASIC4.18□□□□□ -1.74
CLDN18P56856 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN18P56856 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN18P56856 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN18P56856 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN18P56856 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms