Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC034229.6-201ENST00000623704 224 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 MAPK10-344ENST00000641718 3746 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL12P13-201ENST00000310055 497 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-359P-201ENST00000365466 108 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 Y_RNA.422-201ENST00000384054 114 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 Y_RNA.474-201ENST00000384341 102 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 MIR606-201ENST00000384851 96 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 FAUP2-201ENST00000394301 401 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 GAPDHP42-201ENST00000406848 981 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 RN7SKP236-201ENST00000410635 284 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 SNX18P13-201ENST00000412442 529 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 RBMY2JP-201ENST00000425544 1059 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 RPS10P21-201ENST00000430654 475 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 NIP7P1-201ENST00000433227 512 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 BRK1P2-201ENST00000442875 223 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AL035551.1-201ENST00000446931 348 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC026410.2-201ENST00000460281 156 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 PABPC1P3-201ENST00000469174 459 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC087241.2-201ENST00000535801 324 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 MIR3167-201ENST00000579623 85 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL26P30-202ENST00000602923 645 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC115621.1-201ENST00000604653 858 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AC111186.1-201ENST00000604684 130 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AL137000.1-201ENST00000610528 1244 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 AP003486.1-201ENST00000525716 3994 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 PABPC1P8-201ENST00000452851 2086 ntBASIC6.8□□□□□ -1.32
PCDHGA11Q9Y5H2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF402P-201ENST00000404435 3100 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 NUP58P1-201ENST00000502546 1738 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 OR5J1P-201ENST00000313544 939 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 NACAP2-201ENST00000318548 624 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU5E-1-201ENST00000362477 120 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-984P-201ENST00000363236 109 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC068050.1-201ENST00000394891 380 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL034417.1-201ENST00000399343 800 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms