RNA–Protein interactions for RNA: ENST00000442875.1

BRK1P2-201, Transcript of BRICK1, SCAR/WAVE actin-nucleating complex subunit pseudogene 2, humanhuman

BASIC

Gene BRK1P2, Length 223 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1P2-201ENST00000442875 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
BRK1P2-201ENST00000442875 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
BRK1P2-201ENST00000442875 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
BRK1P2-201ENST00000442875 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
BRK1P2-201ENST00000442875 FOXD1Q16676 465 aa17.96■□□□□ 0.47
BRK1P2-201ENST00000442875 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
BRK1P2-201ENST00000442875 MSH5O43196 834 aa16.91■□□□□ 0.3
BRK1P2-201ENST00000442875 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
BRK1P2-201ENST00000442875 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
BRK1P2-201ENST00000442875 ADRA2BP18089 450 aa16.61■□□□□ 0.25
BRK1P2-201ENST00000442875 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
BRK1P2-201ENST00000442875 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
BRK1P2-201ENST00000442875 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
BRK1P2-201ENST00000442875 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
BRK1P2-201ENST00000442875 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
BRK1P2-201ENST00000442875 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
BRK1P2-201ENST00000442875 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
BRK1P2-201ENST00000442875 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
BRK1P2-201ENST00000442875 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
BRK1P2-201ENST00000442875 CACNB1Q02641 598 aaPredicted RBP14.49□□□□□ -0.09
BRK1P2-201ENST00000442875 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
BRK1P2-201ENST00000442875 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
BRK1P2-201ENST00000442875 DNAJC5BQ9UF47 199 aa14.32□□□□□ -0.12
BRK1P2-201ENST00000442875 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
BRK1P2-201ENST00000442875 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
BRK1P2-201ENST00000442875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
BRK1P2-201ENST00000442875 KCNA4P22459 653 aa13.69□□□□□ -0.22
BRK1P2-201ENST00000442875 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
BRK1P2-201ENST00000442875 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
BRK1P2-201ENST00000442875 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
BRK1P2-201ENST00000442875 CAPN15O75808 1086 aa13.43□□□□□ -0.26
BRK1P2-201ENST00000442875 DSG3P32926 999 aa13.43□□□□□ -0.26
BRK1P2-201ENST00000442875 APLP2Q06481 763 aa13.34□□□□□ -0.27
BRK1P2-201ENST00000442875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
BRK1P2-201ENST00000442875 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
BRK1P2-201ENST00000442875 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
BRK1P2-201ENST00000442875 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
BRK1P2-201ENST00000442875 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
BRK1P2-201ENST00000442875 ABCB7O75027 752 aa13.08□□□□□ -0.32
BRK1P2-201ENST00000442875 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
BRK1P2-201ENST00000442875 POTEHQ6S545 545 aa13□□□□□ -0.33
BRK1P2-201ENST00000442875 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
BRK1P2-201ENST00000442875 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
BRK1P2-201ENST00000442875 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
BRK1P2-201ENST00000442875 POLA2Q14181 598 aa12.84□□□□□ -0.35
BRK1P2-201ENST00000442875 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
BRK1P2-201ENST00000442875 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
BRK1P2-201ENST00000442875 ZBTB22O15209 634 aa12.59□□□□□ -0.39
BRK1P2-201ENST00000442875 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
BRK1P2-201ENST00000442875 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
BRK1P2-201ENST00000442875 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
BRK1P2-201ENST00000442875 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
BRK1P2-201ENST00000442875 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
BRK1P2-201ENST00000442875 FBLN2P98095 1184 aa12.25□□□□□ -0.45
BRK1P2-201ENST00000442875 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
BRK1P2-201ENST00000442875 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
BRK1P2-201ENST00000442875 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
BRK1P2-201ENST00000442875 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
BRK1P2-201ENST00000442875 PIP4P2Q8N4L2 257 aa12.24□□□□□ -0.45
BRK1P2-201ENST00000442875 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
BRK1P2-201ENST00000442875 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
BRK1P2-201ENST00000442875 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
BRK1P2-201ENST00000442875 SSUH2Q9Y2M2 353 aa12.07□□□□□ -0.48
BRK1P2-201ENST00000442875 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
BRK1P2-201ENST00000442875 HAX1O00165 279 aa12.01□□□□□ -0.49
BRK1P2-201ENST00000442875 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
BRK1P2-201ENST00000442875 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
BRK1P2-201ENST00000442875 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
BRK1P2-201ENST00000442875 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
BRK1P2-201ENST00000442875 EVX2Q03828 476 aa11.85□□□□□ -0.51
BRK1P2-201ENST00000442875 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
BRK1P2-201ENST00000442875 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
BRK1P2-201ENST00000442875 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
BRK1P2-201ENST00000442875 CHADLQ6NUI6 762 aa11.71□□□□□ -0.53
BRK1P2-201ENST00000442875 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
BRK1P2-201ENST00000442875 GABBR2O75899 941 aa11.61□□□□□ -0.55
BRK1P2-201ENST00000442875 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
BRK1P2-201ENST00000442875 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
BRK1P2-201ENST00000442875 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
BRK1P2-201ENST00000442875 CLCN6P51797 869 aa11.52□□□□□ -0.57
BRK1P2-201ENST00000442875 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
BRK1P2-201ENST00000442875 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
BRK1P2-201ENST00000442875 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.58
BRK1P2-201ENST00000442875 LHX8Q68G74 356 aa11.38□□□□□ -0.59
BRK1P2-201ENST00000442875 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
BRK1P2-201ENST00000442875 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
BRK1P2-201ENST00000442875 PROM2Q8N271 834 aa11.3□□□□□ -0.6
BRK1P2-201ENST00000442875 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.61
BRK1P2-201ENST00000442875 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
BRK1P2-201ENST00000442875 DCBLD2Q96PD2 775 aa11.27□□□□□ -0.61
BRK1P2-201ENST00000442875 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
BRK1P2-201ENST00000442875 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
BRK1P2-201ENST00000442875 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
BRK1P2-201ENST00000442875 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
BRK1P2-201ENST00000442875 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
BRK1P2-201ENST00000442875 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
BRK1P2-201ENST00000442875 PLEKHG5O94827 1062 aa11.01□□□□□ -0.65
BRK1P2-201ENST00000442875 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
BRK1P2-201ENST00000442875 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
BRK1P2-201ENST00000442875 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms