Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL139276.1-201ENST00000311910 1001 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 BECN1P2-201ENST00000407947 812 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 OR6E1P-201ENST00000414424 923 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 BOLA3P4-201ENST00000418151 400 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL592293.2-201ENST00000422292 996 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL354766.1-201ENST00000423396 542 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CR848007.2-201ENST00000424918 787 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 RN7SKP40-201ENST00000517211 242 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC006270.2-201ENST00000578523 652 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 VN1R85P-201ENST00000601587 426 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC125494.3-201ENST00000602759 455 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL512782.1-201ENST00000603093 364 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC040896.1-201ENST00000613819 479 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AP003497.2-201ENST00000624220 967 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 RPS3AP36-201ENST00000398190 775 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC092651.1-201ENST00000426110 312 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 MTCO2P12-201ENST00000427426 682 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL590399.2-201ENST00000427536 309 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL360221.1-201ENST00000445989 335 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL445466.1-201ENST00000448432 357 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC006427.1-201ENST00000514359 712 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 OR8K2P-201ENST00000524645 927 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms