Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AL683813.2-201ENST00000605245 502 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 AC004805.2-201ENST00000605382 482 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 BX664608.1-201ENST00000610519 487 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 MTND5P6-201ENST00000422338 1798 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC009166.2-201ENST00000624410 2833 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 SNRPEP3-201ENST00000338402 276 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 Y_RNA.414-201ENST00000384011 101 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 RNU6-1109P-201ENST00000391187 107 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 RNU6-193P-201ENST00000410977 107 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC073264.1-201ENST00000411508 416 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 FABP5P14-201ENST00000437273 393 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 RPS4XP18-201ENST00000495480 763 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC091965.3-201ENST00000506236 208 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 RN7SKP24-201ENST00000515888 284 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 RNU6-408P-201ENST00000515910 100 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 RNU6-201P-201ENST00000517100 61 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 SERPINA15P-201ENST00000529287 266 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 OR52K3P-201ENST00000531655 943 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC090022.1-201ENST00000546569 311 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC110743.1-201ENST00000584870 478 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 RPL29P33-201ENST00000587474 316 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 AL121612.2-201ENST00000612261 482 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 AC133104.2-201ENST00000615272 193 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 AL442128.2-201ENST00000620246 1824 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 Z83820.1-201ENST00000456978 1499 ntBASIC7.72□□□□□ -1.17
LRCH3Q96II8 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.72□□□□□ -1.17
LRCH3Q96II8 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LRCH3Q96II8 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.71□□□□□ -1.17
LRCH3Q96II8 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LRCH3Q96II8 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LRCH3Q96II8 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
LRCH3Q96II8 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.71□□□□□ -1.17
LRCH3Q96II8 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
LRCH3Q96II8 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LRCH3Q96II8 SALL1P1-201ENST00000438101 3837 ntBASIC7.71□□□□□ -1.17
LRCH3Q96II8 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LRCH3Q96II8 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LRCH3Q96II8 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LRCH3Q96II8 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LRCH3Q96II8 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms