Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNA5SP440-201ENST00000612665 119 ntBASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 AC073488.2-201ENST00000631903 751 ntBASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 SPATA31C1-201ENST00000420021 3895 ntBASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 AC109315.1-201ENST00000584143 1347 ntBASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO4Q2I0M5 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC132219.2-201ENST00000624416 2327 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 Y_RNA.149-201ENST00000363558 117 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 GSTA12P-201ENST00000402398 508 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 OR3A2-201ENST00000408891 1076 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC093698.1-201ENST00000423843 571 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AL831737.1-201ENST00000441288 271 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC064862.4-201ENST00000442180 334 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 BTF3P15-201ENST00000455606 336 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC231760.1-201ENST00000498002 260 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 FTH1P9-201ENST00000513251 355 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 Y_RNA.667-201ENST00000516212 107 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 RNA5SP34-201ENST00000516887 130 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC005357.1-201ENST00000588399 301 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC080078.3-201ENST00000605407 463 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AL627309.6-201ENST00000606857 840 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC091905.1-201ENST00000624400 311 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 RIOK3P1-201ENST00000418778 1528 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 AC090771.1-201ENST00000585803 1618 ntBASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO4Q2I0M5 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 MTCO1P12-201ENST00000414273 1543 ntBASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 AC109780.1-201ENST00000451768 1344 ntBASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 RNA5SP273-201ENST00000362484 113 ntBASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 RN7SKP115-201ENST00000363177 317 ntBASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 MIR548M-201ENST00000408260 86 ntBASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.37□□□□□ -1.39
RSPO4Q2I0M5 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms