Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.77
KRTAP3-1Q9BYR8 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.77
KRTAP3-1Q9BYR8 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC4.03□□□□□ -1.77
KRTAP3-1Q9BYR8 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC010886.1-201ENST00000437380 2869 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 EXOC5P1-201ENST00000510543 1969 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU6-212P-201ENST00000362642 104 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 Y_RNA.126-201ENST00000363382 111 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU6-1059P-201ENST00000363752 98 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU4-42P-201ENST00000364738 142 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 Y_RNA.297-201ENST00000364950 91 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RNA5SP240-201ENST00000365355 128 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU6-378P-201ENST00000384324 107 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU6-434P-201ENST00000384376 107 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU6-393P-201ENST00000384475 107 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 Y_RNA.577-201ENST00000384794 101 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SNORA16.2-201ENST00000390991 127 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SMARCE1P6-201ENST00000398372 1216 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL445189.1-201ENST00000405722 338 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC108032.1-201ENST00000416706 207 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC234781.4-201ENST00000419384 244 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC008155.1-201ENST00000421078 329 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL606490.3-201ENST00000422410 270 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL031733.1-201ENST00000422817 455 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 C4BPAP2-201ENST00000428434 478 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC239367.3-201ENST00000428996 814 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RPL12P4-201ENST00000432629 497 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC092162.1-201ENST00000432828 434 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SDHDP2-201ENST00000436937 465 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL645936.1-201ENST00000441979 518 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RPS18P1-201ENST00000447840 458 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC092647.2-201ENST00000452998 253 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SNORD121B-201ENST00000458838 81 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RN7SL218P-201ENST00000464637 299 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RN7SL449P-201ENST00000464937 286 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 FTH1P2-201ENST00000466086 412 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC117503.1-201ENST00000472241 394 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC008481.2-201ENST00000483614 531 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RPL12P32-201ENST00000484010 494 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 UBA52P7-201ENST00000486088 380 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 SSX8-201ENST00000506270 579 ntBASIC4.02□□□□□ -1.77
KRTAP3-1Q9BYR8 AC093664.1-201ENST00000511779 289 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms