Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 Y_RNA.84-201ENST00000363011 104 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 Y_RNA.105-201ENST00000363182 111 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 Y_RNA.383-201ENST00000383855 97 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 MIR27A-201ENST00000385073 78 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 Y_RNA.586-201ENST00000391146 98 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 PHBP1-201ENST00000392260 808 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 COX6A1P3-201ENST00000404167 293 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AL136131.1-201ENST00000406079 803 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 MED15P9-201ENST00000424716 533 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC007283.2-201ENST00000424739 197 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC079781.2-201ENST00000446424 169 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 CHEK2P4-201ENST00000450340 246 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC005297.2-201ENST00000450430 606 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 RN7SL259P-201ENST00000478499 253 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC140059.1-201ENST00000489238 361 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC083829.1-201ENST00000503756 657 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC105384.2-201ENST00000508433 640 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC116337.1-201ENST00000509680 687 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 HMGN1P9-201ENST00000515212 298 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 RN7SKP14-201ENST00000516000 329 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 SNORA31.6-201ENST00000516241 130 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 SCARNA16.2-201ENST00000516520 172 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 RN7SKP219-201ENST00000516825 296 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AL049870.4-201ENST00000555741 486 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 MIR3613-201ENST00000579844 87 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC072026.1-201ENST00000605023 201 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC000068.3-201ENST00000607934 427 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 SNORD91A-202ENST00000609620 191 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC027506.1-201ENST00000621395 198 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 MSL3P1-202ENST00000440028 1468 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 MTND5P32-201ENST00000560711 1802 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TREML4Q6UXN2 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.38□□□□□ -1.39
TREML4Q6UXN2 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 AC114324.1-201ENST00000504077 3152 ntBASIC6.37□□□□□ -1.39
TREML4Q6UXN2 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 AC009166.2-201ENST00000624410 2833 ntBASIC6.37□□□□□ -1.39
TREML4Q6UXN2 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 BX322639.1-202ENST00000423987 2213 ntBASIC6.37□□□□□ -1.39
TREML4Q6UXN2 AC004972.1-201ENST00000623934 2209 ntBASIC6.37□□□□□ -1.39
TREML4Q6UXN2 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 AL365475.1-201ENST00000565135 1949 ntBASIC6.37□□□□□ -1.39
TREML4Q6UXN2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TREML4Q6UXN2 RNY1P12-201ENST00000364251 105 ntBASIC6.37□□□□□ -1.39
TREML4Q6UXN2 RNU4-48P-201ENST00000365559 182 ntBASIC6.37□□□□□ -1.39
TREML4Q6UXN2 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms