Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC073052.1-201ENST00000440417 714 ntBASIC5.16□□□□□ -1.58
VCPP55072 ARL2BPP10-201ENST00000446487 531 ntBASIC5.16□□□□□ -1.58
VCPP55072 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.16□□□□□ -1.58
VCPP55072 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.16□□□□□ -1.58
VCPP55072 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.16□□□□□ -1.58
VCPP55072 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.16□□□□□ -1.58
VCPP55072 HMGB3P14-201ENST00000494195 599 ntBASIC5.16□□□□□ -1.58
VCPP55072 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.16□□□□□ -1.58
VCPP55072 RNA5SP249-201ENST00000516127 99 ntBASIC5.16□□□□□ -1.58
VCPP55072 NPM1P52-201ENST00000518264 846 ntBASIC5.16□□□□□ -1.58
VCPP55072 NPM1P6-201ENST00000521088 871 ntBASIC5.16□□□□□ -1.58
VCPP55072 AC138701.1-201ENST00000524329 714 ntBASIC5.16□□□□□ -1.58
VCPP55072 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.16□□□□□ -1.58
VCPP55072 AC069366.1-201ENST00000583159 838 ntBASIC5.16□□□□□ -1.58
VCPP55072 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.16□□□□□ -1.58
VCPP55072 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.16□□□□□ -1.58
VCPP55072 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.16□□□□□ -1.58
VCPP55072 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VCPP55072 AC108751.5-201ENST00000492880 1336 ntBASIC5.16□□□□□ -1.58
VCPP55072 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VCPP55072 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VCPP55072 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VCPP55072 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VCPP55072 MTCO1P22-201ENST00000604619 1360 ntBASIC5.16□□□□□ -1.58
VCPP55072 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.15□□□□□ -1.58
VCPP55072 MAPK10-263ENST00000641052 4307 ntBASIC5.15□□□□□ -1.58
VCPP55072 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.15□□□□□ -1.58
VCPP55072 MT-RNR1-201ENST00000389680 954 ntBASIC5.15□□□□□ -1.59
VCPP55072 RNA5SP171-201ENST00000391071 115 ntBASIC5.15□□□□□ -1.59
VCPP55072 AL021331.1-201ENST00000402817 582 ntBASIC5.15□□□□□ -1.59
VCPP55072 CASKP1-201ENST00000412870 582 ntBASIC5.15□□□□□ -1.59
VCPP55072 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.15□□□□□ -1.59
VCPP55072 AC009237.10-201ENST00000414112 510 ntBASIC5.15□□□□□ -1.59
VCPP55072 AC009237.5-201ENST00000414271 501 ntBASIC5.15□□□□□ -1.59
VCPP55072 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.15□□□□□ -1.59
VCPP55072 OR13Z1P-201ENST00000416141 834 ntBASIC5.15□□□□□ -1.59
VCPP55072 GAPDHP49-201ENST00000421421 961 ntBASIC5.15□□□□□ -1.59
VCPP55072 AC006065.1-201ENST00000422539 802 ntBASIC5.15□□□□□ -1.59
VCPP55072 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.15□□□□□ -1.59
VCPP55072 RPL12P34-201ENST00000424532 479 ntBASIC5.15□□□□□ -1.59
VCPP55072 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.15□□□□□ -1.59
VCPP55072 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.15□□□□□ -1.59
VCPP55072 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.15□□□□□ -1.59
VCPP55072 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.15□□□□□ -1.59
VCPP55072 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.15□□□□□ -1.59
VCPP55072 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.15□□□□□ -1.59
VCPP55072 AP000942.1-201ENST00000463969 747 ntBASIC5.15□□□□□ -1.59
VCPP55072 AC109327.1-201ENST00000471666 403 ntBASIC5.15□□□□□ -1.59
VCPP55072 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.15□□□□□ -1.59
VCPP55072 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.15□□□□□ -1.59
VCPP55072 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.15□□□□□ -1.59
VCPP55072 MED28P5-201ENST00000528254 438 ntBASIC5.15□□□□□ -1.59
VCPP55072 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.15□□□□□ -1.59
VCPP55072 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.15□□□□□ -1.59
VCPP55072 CYCSP40-201ENST00000575927 294 ntBASIC5.15□□□□□ -1.59
VCPP55072 FAM106CP-201ENST00000582212 507 ntBASIC5.15□□□□□ -1.59
VCPP55072 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.15□□□□□ -1.59
VCPP55072 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.15□□□□□ -1.59
VCPP55072 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.15□□□□□ -1.59
VCPP55072 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VCPP55072 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VCPP55072 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VCPP55072 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VCPP55072 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VCPP55072 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.15□□□□□ -1.59
VCPP55072 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
VCPP55072 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VCPP55072 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VCPP55072 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VCPP55072 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.14□□□□□ -1.59
VCPP55072 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VCPP55072 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VCPP55072 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.14□□□□□ -1.59
VCPP55072 AC083843.3-201ENST00000623679 2186 ntBASIC5.14□□□□□ -1.59
VCPP55072 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VCPP55072 MIR129-1-201ENST00000384972 72 ntBASIC5.14□□□□□ -1.59
VCPP55072 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.14□□□□□ -1.59
VCPP55072 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.14□□□□□ -1.59
VCPP55072 RPL36AP10-201ENST00000421785 322 ntBASIC5.14□□□□□ -1.59
VCPP55072 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.14□□□□□ -1.59
VCPP55072 AC010733.1-201ENST00000451515 401 ntBASIC5.14□□□□□ -1.59
VCPP55072 MTND2P28-201ENST00000457540 1044 ntBASIC5.14□□□□□ -1.59
VCPP55072 AC091167.1-201ENST00000492017 396 ntBASIC5.14□□□□□ -1.59
VCPP55072 AC020593.1-201ENST00000507399 299 ntBASIC5.14□□□□□ -1.59
VCPP55072 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.14□□□□□ -1.59
VCPP55072 AC093840.1-201ENST00000511599 336 ntBASIC5.14□□□□□ -1.59
VCPP55072 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.14□□□□□ -1.59
VCPP55072 SOX5P1-201ENST00000524155 1127 ntBASIC5.14□□□□□ -1.59
VCPP55072 OR5M2P-201ENST00000529003 936 ntBASIC5.14□□□□□ -1.59
VCPP55072 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.14□□□□□ -1.59
VCPP55072 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.14□□□□□ -1.59
VCPP55072 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.14□□□□□ -1.59
VCPP55072 MIR3939-201ENST00000582614 106 ntBASIC5.14□□□□□ -1.59
VCPP55072 RPL12P25-202ENST00000598100 674 ntBASIC5.14□□□□□ -1.59
VCPP55072 AC098935.2-201ENST00000604222 466 ntBASIC5.14□□□□□ -1.59
VCPP55072 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.14□□□□□ -1.59
VCPP55072 AC243960.7-201ENST00000623532 707 ntBASIC5.14□□□□□ -1.59
VCPP55072 AP002967.1-201ENST00000624203 539 ntBASIC5.14□□□□□ -1.59
VCPP55072 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.14□□□□□ -1.59
VCPP55072 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms