Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNTNAP3Q9BZ76 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 LINC01613-201ENST00000561476 2780 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC008555.1-201ENST00000561778 2757 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 RNU6-666P-201ENST00000363499 107 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 Y_RNA.187-201ENST00000363918 113 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 RN7SKP189-201ENST00000365042 330 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 RNU6-282P-201ENST00000365357 103 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 U8.14-201ENST00000390843 143 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 FDPSP5-201ENST00000399474 1057 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 PRELID1P1-201ENST00000403549 660 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 RN7SKP129-201ENST00000410288 299 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AL354890.1-201ENST00000413730 346 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 VDAC1P10-201ENST00000416715 891 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC007559.1-201ENST00000428736 355 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 H2AFZP6-201ENST00000444403 394 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 MTND6P5-201ENST00000448266 512 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 NXT1P1-201ENST00000458481 316 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 RN7SL610P-201ENST00000463845 291 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC025164.1-201ENST00000496249 478 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 RN7SL775P-201ENST00000498361 336 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 RNU6-1314P-201ENST00000517139 104 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 OR52K3P-201ENST00000531655 943 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 OR5D15P-201ENST00000531671 942 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC073539.2-201ENST00000597113 165 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC000068.3-201ENST00000607934 427 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC211433.2-201ENST00000608433 387 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC005514.1-201ENST00000623521 208 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 AC015689.2-201ENST00000528172 1738 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 NF1P2-201ENST00000556855 2505 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 CASC19-221ENST00000641309 1382 ntBASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTNAP3Q9BZ76 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CNTNAP3Q9BZ76 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTNAP3Q9BZ76 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms