Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 AC036108.4-201ENST00000611654 2516 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.26□□□□□ -1.41
COL8A1P27658 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 AC010132.2-201ENST00000295493 1043 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 SNORA51.1-201ENST00000363243 140 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 RNU6-216P-201ENST00000363282 104 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 RNU6-238P-201ENST00000363313 106 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 RNU6-99P-201ENST00000364721 107 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 RN7SKP130-201ENST00000364924 301 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 Y_RNA.339-201ENST00000365325 102 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 RNU6-456P-201ENST00000384493 107 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.26□□□□□ -1.41
COL8A1P27658 OR10T1P-201ENST00000424327 947 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC093151.1-201ENST00000427711 313 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AC073335.1-201ENST00000427776 363 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.26□□□□□ -1.41
COL8A1P27658 Z83313.1-201ENST00000433780 718 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AL356276.2-201ENST00000435919 558 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 FABP5P14-201ENST00000437273 393 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.26□□□□□ -1.41
COL8A1P27658 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC104058.1-201ENST00000448028 297 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AC010307.1-201ENST00000467206 836 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AC005017.1-201ENST00000482002 490 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 GAPDHP61-201ENST00000507324 1005 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 HMGB1P28-201ENST00000507778 552 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AC108120.2-201ENST00000512973 294 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 AC093878.1-201ENST00000515630 432 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 SNORA25.10-201ENST00000515926 124 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 RANP9-201ENST00000519957 271 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 DEFB131D-201ENST00000526803 184 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 SLC2A13P1-201ENST00000531560 322 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC026826.3-201ENST00000561747 158 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC010547.7-201ENST00000570323 333 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC011891.2-201ENST00000604949 397 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AC141273.2-201ENST00000618989 130 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AL122023.1-201ENST00000622847 530 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.26□□□□□ -1.41
COL8A1P27658 AC011471.4-201ENST00000638271 216 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.26□□□□□ -1.41
COL8A1P27658 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 AL022163.1-201ENST00000430261 1569 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 AF287957.1-201ENST00000607368 1595 ntBASIC6.26□□□□□ -1.41
COL8A1P27658 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.26□□□□□ -1.41
COL8A1P27658 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
COL8A1P27658 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
COL8A1P27658 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL8A1P27658 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC6.25□□□□□ -1.41
COL8A1P27658 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.25□□□□□ -1.41
COL8A1P27658 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.25□□□□□ -1.41
COL8A1P27658 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 Y_RNA.100-201ENST00000363141 102 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL8A1P27658 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.25□□□□□ -1.41
COL8A1P27658 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 RNU6-1304P-201ENST00000411374 106 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 AHCYP8-201ENST00000425108 209 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.25□□□□□ -1.41
COL8A1P27658 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 SS18L2P1-201ENST00000445923 213 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 RPL26P28-201ENST00000451325 435 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 ELOCP24-201ENST00000456370 334 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 AC128713.1-201ENST00000471495 306 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.25□□□□□ -1.41
COL8A1P27658 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 AC108693.1-201ENST00000496068 432 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 AC090638.1-201ENST00000498296 909 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 MTCYBP40-201ENST00000509390 1135 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 Vault.3-201ENST00000516676 95 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 SUB1P1-201ENST00000524415 382 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms