Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
DDX49Q9Y6V7 NEFHP1-201ENST00000412845 2629 ntBASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 TREX1-205ENST00000625293 1783 ntBASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
DDX49Q9Y6V7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 RPPH1-201ENST00000516869 333 ntBASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 C1QBPP2-201ENST00000528754 825 ntBASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX49Q9Y6V7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX49Q9Y6V7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 C2orf69P4-201ENST00000565394 541 ntBASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 AP006294.2-201ENST00000641667 209 ntBASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms