Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI2Q9Y5P3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 AL158211.5-201ENST00000623583 2518 ntBASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI2Q9Y5P3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.69■□□□□ 0.74
RAI2Q9Y5P3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 C1QL1P1-201ENST00000568105 661 ntBASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 HTR7P1-201ENST00000538670 1336 ntBASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAI2Q9Y5P3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 AC133561.5-201ENST00000635547 218 ntBASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAI2Q9Y5P3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms