Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA9Q9Y5G4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 EGLN1P1-201ENST00000531623 762 ntBASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA9Q9Y5G4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 TSPY14P-201ENST00000303979 915 ntBASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 MESTP1-201ENST00000404287 994 ntBASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 LIN28AP1-201ENST00000429574 405 ntBASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA9Q9Y5G4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 YBX1P10-201ENST00000444752 975 ntBASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA9Q9Y5G4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms