Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 AC092171.4-201ENST00000609130 632 ntBASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 CROCCP3-202ENST00000420820 1947 ntBASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHTOPQ9Y3Y2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 SYT6-210ENST00000641643 1587 ntBASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 MIR6724-1-201ENST00000616420 92 ntBASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 MIR6724-2-201ENST00000616483 92 ntBASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 MIR6724-4-201ENST00000617390 92 ntBASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 MIR6724-3-201ENST00000622482 92 ntBASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms