Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 MESTP1-201ENST00000404287 994 ntBASIC20.86■□□□□ 0.93
SIX4Q9UIU6 TSPY15P-201ENST00000457163 923 ntBASIC20.86■□□□□ 0.93
SIX4Q9UIU6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 NUDT16P1-203ENST00000513809 620 ntBASIC20.86■□□□□ 0.93
SIX4Q9UIU6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIX4Q9UIU6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 Z85996.1-201ENST00000494644 937 ntBASIC20.85■□□□□ 0.93
SIX4Q9UIU6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 AP003071.4-201ENST00000562276 1284 ntBASIC20.85■□□□□ 0.93
SIX4Q9UIU6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 MIR4785-201ENST00000585005 73 ntBASIC20.85■□□□□ 0.93
SIX4Q9UIU6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX4Q9UIU6 AC104417.2-201ENST00000562989 1793 ntBASIC20.85■□□□□ 0.93
SIX4Q9UIU6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 ZNF815P-204ENST00000434898 1737 ntBASIC20.84■□□□□ 0.93
SIX4Q9UIU6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 AC116562.2-201ENST00000507042 360 ntBASIC20.84■□□□□ 0.93
SIX4Q9UIU6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 AL031985.4-201ENST00000642138 673 ntBASIC20.84■□□□□ 0.93
SIX4Q9UIU6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX4Q9UIU6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 AC011506.1-201ENST00000474329 610 ntBASIC20.83■□□□□ 0.93
SIX4Q9UIU6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 AL355075.4-201ENST00000554988 638 ntBASIC20.83■□□□□ 0.93
SIX4Q9UIU6 AL160286.2-201ENST00000567150 934 ntBASIC20.83■□□□□ 0.93
SIX4Q9UIU6 AC026271.3-201ENST00000571884 352 ntBASIC20.83■□□□□ 0.93
SIX4Q9UIU6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 REXO1L10P-201ENST00000615707 1290 ntBASIC20.83■□□□□ 0.93
SIX4Q9UIU6 REXO1L12P-201ENST00000622156 912 ntBASIC20.83■□□□□ 0.93
SIX4Q9UIU6 AC131212.4-201ENST00000623606 975 ntBASIC20.83■□□□□ 0.93
SIX4Q9UIU6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.83■□□□□ 0.93
SIX4Q9UIU6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIX4Q9UIU6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SIX4Q9UIU6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 AL355355.2-201ENST00000442321 338 ntBASIC20.82■□□□□ 0.92
SIX4Q9UIU6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms