Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 FAM201B-201ENST00000458407 597 ntBASIC19.68■□□□□ 0.74
HACD3Q9P035 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.68■□□□□ 0.74
HACD3Q9P035 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.68■□□□□ 0.74
HACD3Q9P035 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.68■□□□□ 0.74
HACD3Q9P035 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.68■□□□□ 0.74
HACD3Q9P035 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HACD3Q9P035 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HACD3Q9P035 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HACD3Q9P035 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.68■□□□□ 0.74
HACD3Q9P035 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HACD3Q9P035 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HACD3Q9P035 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HACD3Q9P035 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.68■□□□□ 0.74
HACD3Q9P035 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.67■□□□□ 0.74
HACD3Q9P035 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
HACD3Q9P035 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HACD3Q9P035 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HACD3Q9P035 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HACD3Q9P035 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.67■□□□□ 0.74
HACD3Q9P035 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.67■□□□□ 0.74
HACD3Q9P035 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 AC073648.6-201ENST00000641589 218 ntBASIC19.67■□□□□ 0.74
HACD3Q9P035 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HACD3Q9P035 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.67■□□□□ 0.74
HACD3Q9P035 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 AC125437.2-201ENST00000625180 2167 ntBASIC19.67■□□□□ 0.74
HACD3Q9P035 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HACD3Q9P035 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
HACD3Q9P035 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
HACD3Q9P035 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.67■□□□□ 0.74
HACD3Q9P035 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HACD3Q9P035 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
HACD3Q9P035 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HACD3Q9P035 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HACD3Q9P035 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HACD3Q9P035 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HACD3Q9P035 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HACD3Q9P035 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.66■□□□□ 0.74
HACD3Q9P035 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.66■□□□□ 0.74
HACD3Q9P035 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.66■□□□□ 0.74
HACD3Q9P035 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.66■□□□□ 0.74
HACD3Q9P035 AC233263.1-201ENST00000578059 224 ntBASIC19.66■□□□□ 0.74
HACD3Q9P035 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.66■□□□□ 0.74
HACD3Q9P035 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.66■□□□□ 0.74
HACD3Q9P035 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HACD3Q9P035 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HACD3Q9P035 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.66■□□□□ 0.74
HACD3Q9P035 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HACD3Q9P035 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.65■□□□□ 0.74
HACD3Q9P035 HCG11-201ENST00000411553 5696 ntBASIC19.65■□□□□ 0.74
HACD3Q9P035 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.65■□□□□ 0.74
HACD3Q9P035 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.65■□□□□ 0.74
HACD3Q9P035 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HACD3Q9P035 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 AC128676.1-201ENST00000454392 318 ntBASIC19.65■□□□□ 0.74
HACD3Q9P035 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.65■□□□□ 0.74
HACD3Q9P035 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.65■□□□□ 0.74
HACD3Q9P035 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
HACD3Q9P035 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.65■□□□□ 0.74
HACD3Q9P035 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
HACD3Q9P035 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HACD3Q9P035 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.65■□□□□ 0.74
HACD3Q9P035 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 TREX1-205ENST00000625293 1783 ntBASIC19.65■□□□□ 0.74
HACD3Q9P035 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.65■□□□□ 0.74
HACD3Q9P035 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HACD3Q9P035 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
HACD3Q9P035 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
HACD3Q9P035 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.64■□□□□ 0.74
HACD3Q9P035 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HACD3Q9P035 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.64■□□□□ 0.73
HACD3Q9P035 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms