Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 SLC7A5P1-201ENST00000568957 537 ntBASIC18.83■□□□□ 0.6
NDE1Q9NXR1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 AL031963.3-201ENST00000606441 850 ntBASIC18.83■□□□□ 0.6
NDE1Q9NXR1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 KRT8P20-201ENST00000423953 1409 ntBASIC18.83■□□□□ 0.6
NDE1Q9NXR1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NDE1Q9NXR1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 EDA-201ENST00000338901 1233 ntBASIC18.82■□□□□ 0.6
NDE1Q9NXR1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 AP001330.3-201ENST00000520123 633 ntBASIC18.82■□□□□ 0.6
NDE1Q9NXR1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDE1Q9NXR1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 AC090164.3-201ENST00000610780 2143 ntBASIC18.81■□□□□ 0.6
NDE1Q9NXR1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDE1Q9NXR1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.8■□□□□ 0.6
NDE1Q9NXR1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 AC104187.1-201ENST00000607510 612 ntBASIC18.8■□□□□ 0.6
NDE1Q9NXR1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.8■□□□□ 0.6
NDE1Q9NXR1 AL161938.1-201ENST00000569833 2180 ntBASIC18.79■□□□□ 0.6
NDE1Q9NXR1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 AC091305.1-201ENST00000479476 895 ntBASIC18.79■□□□□ 0.6
NDE1Q9NXR1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms