Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 AL161938.1-201ENST00000569833 2180 ntBASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 AC073592.3-201ENST00000625118 1834 ntBASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMCO4Q9NRQ5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 AC093525.10-201ENST00000625130 1569 ntBASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.3■□□□□ 0.04
SMCO4Q9NRQ5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 MIR6765-201ENST00000614092 87 ntBASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 AC018695.7-201ENST00000624587 2492 ntBASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 AC126763.1-201ENST00000552015 2118 ntBASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.29■□□□□ 0.04
SMCO4Q9NRQ5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SMCO4Q9NRQ5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms