Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR1BQ9H9Y6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 AL049597.2-201ENST00000565575 961 ntBASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 AC092865.7-201ENST00000641832 219 ntBASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 AC112907.3-201ENST00000577781 2400 ntBASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR1BQ9H9Y6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 NBPF21P-201ENST00000425093 1451 ntBASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 FAM197Y1-201ENST00000421178 764 ntBASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 AC073195.1-201ENST00000607241 877 ntBASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 AC098818.2-201ENST00000564925 2320 ntBASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR1BQ9H9Y6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 BX323043.1-201ENST00000641006 1765 ntBASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 AC145285.6-201ENST00000604632 637 ntBASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 AC005363.2-201ENST00000618631 242 ntBASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLR1BQ9H9Y6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms