Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 FAAHP1-202ENST00000446499 1238 ntBASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 CKBP1-201ENST00000565489 1086 ntBASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 AC092119.3-201ENST00000612618 583 ntBASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 AL137060.1-201ENST00000618151 2648 ntBASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 AC011484.1-201ENST00000377652 1995 ntBASIC21.47■■□□□ 1.03
UBE2OQ9C0C9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 AC026310.3-201ENST00000625186 2373 ntBASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 AC112907.2-201ENST00000448639 330 ntBASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 KRT8P20-201ENST00000423953 1409 ntBASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UBE2OQ9C0C9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 AL022342.1-201ENST00000400363 863 ntBASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 AL023803.3-201ENST00000615559 522 ntBASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.45■■□□□ 1.02
UBE2OQ9C0C9 AC092667.1-201ENST00000434301 2586 ntBASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 AL049796.1-201ENST00000565336 1766 ntBASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 TUBB8P6-201ENST00000436895 1288 ntBASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 AC083849.1-201ENST00000615227 514 ntBASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2OQ9C0C9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 AL353719.1-201ENST00000566847 864 ntBASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 MIR2861-201ENST00000636310 90 ntBASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2OQ9C0C9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms