Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3Q9BZ76 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 PMS2P7-201ENST00000506558 1336 ntBASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 AC008040.2-201ENST00000461049 708 ntBASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 HLA-J-203ENST00000494367 1087 ntBASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 AP002414.4-201ENST00000589764 1148 ntBASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 AC239800.4-201ENST00000603712 296 ntBASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3Q9BZ76 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 BX119927.1-201ENST00000636596 1552 ntBASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.54■□□□□ 0.56
CNTNAP3Q9BZ76 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 RCC2P6-201ENST00000526625 1557 ntBASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
CNTNAP3Q9BZ76 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3Q9BZ76 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNTNAP3Q9BZ76 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNTNAP3Q9BZ76 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNTNAP3Q9BZ76 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.52■□□□□ 0.55
CNTNAP3Q9BZ76 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms