Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 UNC93B2-201ENST00000285383 730 ntBASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 AC008040.2-201ENST00000461049 708 ntBASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 AL160286.2-201ENST00000567150 934 ntBASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM47Q9BQJ4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 RCC2P6-201ENST00000526625 1557 ntBASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 AC087499.1-201ENST00000418141 1075 ntBASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 AC130371.2-201ENST00000619443 611 ntBASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TMEM47Q9BQJ4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 AC211429.1-201ENST00000415277 523 ntBASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 AC073130.3-201ENST00000624389 2278 ntBASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM47Q9BQJ4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 KRT8P9-201ENST00000558927 1449 ntBASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM47Q9BQJ4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM47Q9BQJ4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM47Q9BQJ4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
TMEM47Q9BQJ4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 MMP23A-201ENST00000234610 1017 ntBASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 AL390955.1-201ENST00000428694 934 ntBASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.64■■□□□ 1.21
TMEM47Q9BQJ4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms