Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 TUBB8P6-201ENST00000436895 1288 ntBASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 AC069544.1-201ENST00000609399 999 ntBASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MS4A4EQ96PG1 AL032819.2-201ENST00000624543 2162 ntBASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 ZNF815P-204ENST00000434898 1737 ntBASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 KRT17P3-201ENST00000420566 1262 ntBASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MS4A4EQ96PG1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MS4A4EQ96PG1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
MS4A4EQ96PG1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MS4A4EQ96PG1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms