Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 FAM197Y1-201ENST00000421178 764 ntBASIC20.08■□□□□ 0.81
RPRD1AQ96P16 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 TSPY7P-201ENST00000431358 1114 ntBASIC20.08■□□□□ 0.81
RPRD1AQ96P16 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 KSR1P1-201ENST00000446298 240 ntBASIC20.08■□□□□ 0.81
RPRD1AQ96P16 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 MIR4497-201ENST00000583208 89 ntBASIC20.08■□□□□ 0.81
RPRD1AQ96P16 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.08■□□□□ 0.81
RPRD1AQ96P16 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RPRD1AQ96P16 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RPRD1AQ96P16 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.08■□□□□ 0.8
RPRD1AQ96P16 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RPRD1AQ96P16 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPRD1AQ96P16 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 CR392000.1-201ENST00000624770 1228 ntBASIC20.07■□□□□ 0.8
RPRD1AQ96P16 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.07■□□□□ 0.8
RPRD1AQ96P16 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPRD1AQ96P16 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 KRT16P1-201ENST00000399124 1418 ntBASIC20.05■□□□□ 0.8
RPRD1AQ96P16 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 AL445675.2-201ENST00000620291 557 ntBASIC20.05■□□□□ 0.8
RPRD1AQ96P16 HLA-A-209ENST00000638375 975 ntBASIC20.05■□□□□ 0.8
RPRD1AQ96P16 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPRD1AQ96P16 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms