Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 FBXW4P1-201ENST00000426721 2239 ntBASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 AC112907.2-201ENST00000448639 330 ntBASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN4Q96NY8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 STARP1-201ENST00000397973 869 ntBASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 ATP5G2P1-201ENST00000433580 426 ntBASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 KRT8P45-201ENST00000414328 1447 ntBASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.18■□□□□ 0.82
NECTIN4Q96NY8 AL117328.2-201ENST00000624617 1940 ntBASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NECTIN4Q96NY8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 SLC25A24-204ENST00000569674 2357 ntBASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 AC083849.1-201ENST00000615227 514 ntBASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NECTIN4Q96NY8 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NECTIN4Q96NY8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms