Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.53■□□□□ 0.24
SPG11Q96JI7 LINC01465-201ENST00000408887 1940 ntBASIC16.52■□□□□ 0.24
SPG11Q96JI7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPG11Q96JI7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SPG11Q96JI7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.52■□□□□ 0.24
SPG11Q96JI7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
SPG11Q96JI7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPG11Q96JI7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPG11Q96JI7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.52■□□□□ 0.24
SPG11Q96JI7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPG11Q96JI7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SPG11Q96JI7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.52■□□□□ 0.24
SPG11Q96JI7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPG11Q96JI7 KRT18P38-201ENST00000449496 1282 ntBASIC16.52■□□□□ 0.24
SPG11Q96JI7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.52■□□□□ 0.24
SPG11Q96JI7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SPG11Q96JI7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPG11Q96JI7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.52■□□□□ 0.23
SPG11Q96JI7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
SPG11Q96JI7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.52■□□□□ 0.23
SPG11Q96JI7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.52■□□□□ 0.23
SPG11Q96JI7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 AP000523.1-201ENST00000398242 1049 ntBASIC16.51■□□□□ 0.23
SPG11Q96JI7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 SMG8-203ENST00000578922 2178 ntBASIC16.51■□□□□ 0.23
SPG11Q96JI7 AC244015.2-201ENST00000616358 1861 ntBASIC16.51■□□□□ 0.23
SPG11Q96JI7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 STARP1-201ENST00000397973 869 ntBASIC16.51■□□□□ 0.23
SPG11Q96JI7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SPG11Q96JI7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPG11Q96JI7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 ATP5G2P1-201ENST00000433580 426 ntBASIC16.5■□□□□ 0.23
SPG11Q96JI7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 NEK4P2-201ENST00000580004 1012 ntBASIC16.5■□□□□ 0.23
SPG11Q96JI7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.5■□□□□ 0.23
SPG11Q96JI7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.5■□□□□ 0.23
SPG11Q96JI7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPG11Q96JI7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 AL845331.1-201ENST00000424978 1190 ntBASIC16.49■□□□□ 0.23
SPG11Q96JI7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 IFNL4P1-201ENST00000607083 540 ntBASIC16.49■□□□□ 0.23
SPG11Q96JI7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.49■□□□□ 0.23
SPG11Q96JI7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPG11Q96JI7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms