Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 AL441883.1-201ENST00000566170 1045 ntBASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNRNP40Q96DI7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 DUSP5P1-201ENST00000441325 1139 ntBASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 CA15P1-201ENST00000481698 905 ntBASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.53■□□□□ 0.4
SNRNP40Q96DI7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 AC005332.1-201ENST00000577698 1310 ntBASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 AL160286.2-201ENST00000567150 934 ntBASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNRNP40Q96DI7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNRNP40Q96DI7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SNRNP40Q96DI7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 AL450487.1-201ENST00000426799 995 ntBASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 PRSS44-201ENST00000515154 1146 ntBASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 AC116407.4-201ENST00000623319 1061 ntBASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRNP40Q96DI7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 SMG8-203ENST00000578922 2178 ntBASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 HCG4P8-203ENST00000443049 980 ntBASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.5■□□□□ 0.39
SNRNP40Q96DI7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms