Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.39□□□□□ -0.11
RNF183Q96D59 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF183Q96D59 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF183Q96D59 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF183Q96D59 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF183Q96D59 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF183Q96D59 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RNF183Q96D59 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF183Q96D59 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF183Q96D59 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF183Q96D59 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF183Q96D59 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF183Q96D59 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF183Q96D59 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF183Q96D59 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF183Q96D59 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RNF183Q96D59 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF183Q96D59 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RNF183Q96D59 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF183Q96D59 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF183Q96D59 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF183Q96D59 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF183Q96D59 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RNF183Q96D59 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF183Q96D59 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF183Q96D59 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.38□□□□□ -0.11
RNF183Q96D59 MIR4785-201ENST00000585005 73 ntBASIC14.38□□□□□ -0.11
RNF183Q96D59 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF183Q96D59 AC113410.3-201ENST00000623366 203 ntBASIC14.38□□□□□ -0.11
RNF183Q96D59 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.38□□□□□ -0.11
RNF183Q96D59 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
RNF183Q96D59 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RNF183Q96D59 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF183Q96D59 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RNF183Q96D59 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF183Q96D59 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF183Q96D59 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RNF183Q96D59 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF183Q96D59 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RNF183Q96D59 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RNF183Q96D59 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RNF183Q96D59 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RNF183Q96D59 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RNF183Q96D59 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 TSPY7P-201ENST00000431358 1114 ntBASIC14.37□□□□□ -0.11
RNF183Q96D59 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF183Q96D59 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF183Q96D59 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF183Q96D59 AF186192.3-201ENST00000583427 947 ntBASIC14.37□□□□□ -0.11
RNF183Q96D59 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF183Q96D59 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF183Q96D59 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RNF183Q96D59 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF183Q96D59 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF183Q96D59 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF183Q96D59 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF183Q96D59 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF183Q96D59 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RNF183Q96D59 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF183Q96D59 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
RNF183Q96D59 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RNF183Q96D59 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms