Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.27■□□□□ 0.67
SH3KBP1Q96B97 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3KBP1Q96B97 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 MIR4785-201ENST00000585005 73 ntBASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 HTR7P1-201ENST00000538670 1336 ntBASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3KBP1Q96B97 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3KBP1Q96B97 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3KBP1Q96B97 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms