Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC092667.1-201ENST00000434301 2586 ntBASIC21.97■■□□□ 1.11
VTI1AQ96AJ9 DPP3P2-201ENST00000416030 1696 ntBASIC21.97■■□□□ 1.11
VTI1AQ96AJ9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VTI1AQ96AJ9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VTI1AQ96AJ9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VTI1AQ96AJ9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VTI1AQ96AJ9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VTI1AQ96AJ9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 BX664615.1-201ENST00000443558 458 ntBASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 KRT16P6-202ENST00000425692 1426 ntBASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.96■■□□□ 1.11
VTI1AQ96AJ9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
VTI1AQ96AJ9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 LINC01238-205ENST00000567549 1107 ntBASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTI1AQ96AJ9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 AC004980.1-204ENST00000429707 299 ntBASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 YBX1P10-201ENST00000444752 975 ntBASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 AC116351.2-201ENST00000606540 1585 ntBASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.94■■□□□ 1.1
VTI1AQ96AJ9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 INGX-201ENST00000359239 846 ntBASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms