Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 AC116562.4-201ENST00000641316 2276 ntBASIC18.72■□□□□ 0.59
UBE2E3Q969T4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.72■□□□□ 0.59
UBE2E3Q969T4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 AC004264.1-201ENST00000608354 794 ntBASIC18.71■□□□□ 0.59
UBE2E3Q969T4 AC069544.1-201ENST00000609399 999 ntBASIC18.71■□□□□ 0.59
UBE2E3Q969T4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE2E3Q969T4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.7■□□□□ 0.58
UBE2E3Q969T4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 NBPF21P-201ENST00000425093 1451 ntBASIC18.7■□□□□ 0.58
UBE2E3Q969T4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE2E3Q969T4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 AC005332.7-201ENST00000614046 2005 ntBASIC18.69■□□□□ 0.58
UBE2E3Q969T4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 MTDHP1-201ENST00000605323 784 ntBASIC18.69■□□□□ 0.58
UBE2E3Q969T4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UBE2E3Q969T4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms