Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP2A3Q93084 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP2A3Q93084 AC097493.4-201ENST00000641197 219 ntBASIC20.48■□□□□ 0.87
ATP2A3Q93084 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP2A3Q93084 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP2A3Q93084 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATP2A3Q93084 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ATP2A3Q93084 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ATP2A3Q93084 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
ATP2A3Q93084 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 AFG3L1P-217ENST00000557444 2447 ntBASIC20.47■□□□□ 0.87
ATP2A3Q93084 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATP2A3Q93084 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A3Q93084 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.46■□□□□ 0.87
ATP2A3Q93084 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.46■□□□□ 0.87
ATP2A3Q93084 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
ATP2A3Q93084 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ATP2A3Q93084 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 MIR1224-201ENST00000408193 85 ntBASIC20.46■□□□□ 0.87
ATP2A3Q93084 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.46■□□□□ 0.87
ATP2A3Q93084 NUDT16P1-203ENST00000513809 620 ntBASIC20.46■□□□□ 0.87
ATP2A3Q93084 KRT18P21-201ENST00000515767 1272 ntBASIC20.46■□□□□ 0.87
ATP2A3Q93084 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ATP2A3Q93084 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ATP2A3Q93084 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ATP2A3Q93084 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A3Q93084 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
ATP2A3Q93084 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 AC092720.2-201ENST00000602388 1665 ntBASIC20.45■□□□□ 0.86
ATP2A3Q93084 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 MMP23A-201ENST00000234610 1017 ntBASIC20.45■□□□□ 0.86
ATP2A3Q93084 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 AC012306.2-201ENST00000609350 630 ntBASIC20.45■□□□□ 0.86
ATP2A3Q93084 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A3Q93084 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2A3Q93084 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
ATP2A3Q93084 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.44■□□□□ 0.86
ATP2A3Q93084 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.44■□□□□ 0.86
ATP2A3Q93084 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.44■□□□□ 0.86
ATP2A3Q93084 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.44■□□□□ 0.86
ATP2A3Q93084 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.44■□□□□ 0.86
ATP2A3Q93084 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
ATP2A3Q93084 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms