Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP7Q93009 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.23■□□□□ 0.67
USP7Q93009 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.22■□□□□ 0.67
USP7Q93009 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.22■□□□□ 0.67
USP7Q93009 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.22■□□□□ 0.67
USP7Q93009 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.22■□□□□ 0.67
USP7Q93009 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.22■□□□□ 0.67
USP7Q93009 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.22■□□□□ 0.67
USP7Q93009 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.22■□□□□ 0.67
USP7Q93009 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.22■□□□□ 0.67
USP7Q93009 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.22■□□□□ 0.67
USP7Q93009 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
USP7Q93009 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.22■□□□□ 0.67
USP7Q93009 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.22■□□□□ 0.67
USP7Q93009 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.22■□□□□ 0.67
USP7Q93009 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 KRT8P20-201ENST00000423953 1409 ntBASIC19.22■□□□□ 0.67
USP7Q93009 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.22■□□□□ 0.67
USP7Q93009 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.22■□□□□ 0.67
USP7Q93009 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP7Q93009 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.22■□□□□ 0.67
USP7Q93009 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
USP7Q93009 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP7Q93009 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.21■□□□□ 0.67
USP7Q93009 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.21■□□□□ 0.67
USP7Q93009 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.21■□□□□ 0.67
USP7Q93009 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
USP7Q93009 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.21■□□□□ 0.67
USP7Q93009 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.21■□□□□ 0.67
USP7Q93009 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.21■□□□□ 0.67
USP7Q93009 AC009237.14-201ENST00000609975 1594 ntBASIC19.21■□□□□ 0.67
USP7Q93009 AC010331.1-201ENST00000611423 582 ntBASIC19.21■□□□□ 0.67
USP7Q93009 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.21■□□□□ 0.67
USP7Q93009 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP7Q93009 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
USP7Q93009 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.2■□□□□ 0.66
USP7Q93009 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP7Q93009 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP7Q93009 TREX1-205ENST00000625293 1783 ntBASIC19.2■□□□□ 0.66
USP7Q93009 AC087499.1-201ENST00000418141 1075 ntBASIC19.2■□□□□ 0.66
USP7Q93009 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.2■□□□□ 0.66
USP7Q93009 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 AL355075.4-201ENST00000554988 638 ntBASIC19.2■□□□□ 0.66
USP7Q93009 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.2■□□□□ 0.66
USP7Q93009 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP7Q93009 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP7Q93009 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
USP7Q93009 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP7Q93009 KRT16P6-202ENST00000425692 1426 ntBASIC19.19■□□□□ 0.66
USP7Q93009 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP7Q93009 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.19■□□□□ 0.66
USP7Q93009 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP7Q93009 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP7Q93009 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.19■□□□□ 0.66
USP7Q93009 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.19■□□□□ 0.66
USP7Q93009 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.19■□□□□ 0.66
USP7Q93009 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP7Q93009 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
USP7Q93009 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
USP7Q93009 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP7Q93009 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP7Q93009 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP7Q93009 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
USP7Q93009 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms