Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FNDC9Q8TBE3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FNDC9Q8TBE3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FNDC9Q8TBE3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
FNDC9Q8TBE3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.52■□□□□ 0.39
FNDC9Q8TBE3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 RNF165-205ENST00000588679 2904 ntBASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 KRT18P16-201ENST00000510337 1294 ntBASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FNDC9Q8TBE3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 CD177P1-201ENST00000606252 935 ntBASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 AC073195.1-201ENST00000607241 877 ntBASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 TMEM179-206ENST00000616017 1645 ntBASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.5■□□□□ 0.39
FNDC9Q8TBE3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 FAM197Y1-201ENST00000421178 764 ntBASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 C1QL1P1-201ENST00000568105 661 ntBASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 MIR4785-201ENST00000585005 73 ntBASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 AL353708.3-201ENST00000610272 989 ntBASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FNDC9Q8TBE3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 KRT17P2-201ENST00000300992 1314 ntBASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms