Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 AC018695.7-201ENST00000624587 2492 ntBASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 AL049796.1-201ENST00000565336 1766 ntBASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 AL162727.3-201ENST00000635661 2787 ntBASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
SPTSSBQ8NFR3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 AC126335.2-201ENST00000623362 4637 ntBASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 GFER-205ENST00000569451 517 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 AC018755.3-202ENST00000596210 929 ntBASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPTSSBQ8NFR3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 FP325331.1-202ENST00000623531 1380 ntBASIC10.67□□□□□ -0.7
SPTSSBQ8NFR3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms