Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 AC007322.1-201ENST00000426983 750 ntBASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 CYP2T1P-201ENST00000432607 1285 ntBASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 KRT8P20-201ENST00000423953 1409 ntBASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 MIR5787-201ENST00000611784 55 ntBASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 AP001271.2-201ENST00000624018 1556 ntBASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF1Q8NEP3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 AC007613.1-201ENST00000572811 2597 ntBASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
DNAAF1Q8NEP3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 AL589743.5-201ENST00000616611 1050 ntBASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.08■□□□□ 0.32
DNAAF1Q8NEP3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 HLA-G-202ENST00000376815 851 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms