Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 AC133681.1-201ENST00000465482 601 ntBASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRFBP1Q8NEF9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 AC233263.1-201ENST00000578059 224 ntBASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 ITM2C-210ENST00000620962 501 ntBASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 AL023875.1-201ENST00000640777 796 ntBASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRFBP1Q8NEF9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 AL158211.5-201ENST00000623583 2518 ntBASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 KRT18P29-201ENST00000397031 1267 ntBASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 AC110285.5-201ENST00000611501 352 ntBASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SRFBP1Q8NEF9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 KRASP1-201ENST00000407852 552 ntBASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 TSPY20P-201ENST00000450910 630 ntBASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 KRT16P5-201ENST00000455284 522 ntBASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.54■□□□□ 0.56
SRFBP1Q8NEF9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms