Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 RPS2P52-201ENST00000469610 820 ntBASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 AC124283.5-201ENST00000624661 1809 ntBASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 AC116562.4-201ENST00000641316 2276 ntBASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF439Q8NDP4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF439Q8NDP4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF439Q8NDP4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 HLA-L-209ENST00000420110 1011 ntBASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.08■□□□□ 0.16
ZNF439Q8NDP4 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms