Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 MYCNOS-205ENST00000641950 531 ntBASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71LQ8N9Z2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 AL162412.1-201ENST00000567129 965 ntBASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 CROCCP3-202ENST00000420820 1947 ntBASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71LQ8N9Z2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 MFSD11-216ENST00000590393 1141 ntBASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 UBE2DNL-204ENST00000602536 740 ntBASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71LQ8N9Z2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 MCRIP2P1-201ENST00000394346 511 ntBASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms