Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
DTX3Q8N9I9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DTX3Q8N9I9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
DTX3Q8N9I9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
DTX3Q8N9I9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 PCDHB18P-201ENST00000524813 2368 ntBASIC17.14■□□□□ 0.33
DTX3Q8N9I9 CROCCP3-202ENST00000420820 1947 ntBASIC17.14■□□□□ 0.33
DTX3Q8N9I9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 AC079140.4-201ENST00000507448 529 ntBASIC17.14■□□□□ 0.33
DTX3Q8N9I9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
DTX3Q8N9I9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 AC137761.2-201ENST00000561729 223 ntBASIC17.13■□□□□ 0.33
DTX3Q8N9I9 AC145350.3-201ENST00000569033 163 ntBASIC17.13■□□□□ 0.33
DTX3Q8N9I9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 AC008894.3-201ENST00000624324 3103 ntBASIC17.13■□□□□ 0.33
DTX3Q8N9I9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms