Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 NIFKP9-201ENST00000419265 221 ntBASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 AL158211.5-201ENST00000623583 2518 ntBASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
RASGEF1AQ8N9B8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 MIR718-201ENST00000390190 70 ntBASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 HLA-A-209ENST00000638375 975 ntBASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 AL049637.2-201ENST00000641778 930 ntBASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1AQ8N9B8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 AC113410.3-201ENST00000623366 203 ntBASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1AQ8N9B8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 AC073195.1-201ENST00000607241 877 ntBASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1AQ8N9B8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 FAM197Y1-201ENST00000421178 764 ntBASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 KSR1P1-201ENST00000446298 240 ntBASIC19.16■□□□□ 0.66
RASGEF1AQ8N9B8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms