Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 AC008040.2-201ENST00000461049 708 ntBASIC15.22■□□□□ 0.03
C3orf56Q8N813 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 ZNF444P1-201ENST00000559497 298 ntBASIC15.22■□□□□ 0.03
C3orf56Q8N813 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C3orf56Q8N813 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C3orf56Q8N813 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C3orf56Q8N813 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.22■□□□□ 0.03
C3orf56Q8N813 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C3orf56Q8N813 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 AC116351.2-201ENST00000606540 1585 ntBASIC15.21■□□□□ 0.03
C3orf56Q8N813 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 AC112907.2-201ENST00000448639 330 ntBASIC15.21■□□□□ 0.03
C3orf56Q8N813 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 RN7SL510P-201ENST00000581311 263 ntBASIC15.21■□□□□ 0.03
C3orf56Q8N813 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 AL023803.3-201ENST00000615559 522 ntBASIC15.21■□□□□ 0.03
C3orf56Q8N813 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.21■□□□□ 0.03
C3orf56Q8N813 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
C3orf56Q8N813 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
C3orf56Q8N813 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
C3orf56Q8N813 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
C3orf56Q8N813 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 KRT16P6-202ENST00000425692 1426 ntBASIC15.2■□□□□ 0.02
C3orf56Q8N813 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.2■□□□□ 0.02
C3orf56Q8N813 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 ATP5G2P1-201ENST00000433580 426 ntBASIC15.2■□□□□ 0.02
C3orf56Q8N813 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 AC111152.3-201ENST00000569699 673 ntBASIC15.2■□□□□ 0.02
C3orf56Q8N813 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
C3orf56Q8N813 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.2■□□□□ 0.02
C3orf56Q8N813 TFP1-202ENST00000475455 1573 ntBASIC15.19■□□□□ 0.02
C3orf56Q8N813 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms