Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 MIR1238-201ENST00000408483 83 ntBASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 FITM1-202ENST00000559294 800 ntBASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 MIR6786-201ENST00000616843 113 ntBASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 AL445675.2-201ENST00000620291 557 ntBASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHTF2Q8N3S3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 AL390955.1-201ENST00000428694 934 ntBASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHTF2Q8N3S3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 CYP2D8P-201ENST00000433633 1490 ntBASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHTF2Q8N3S3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 AC099778.1-201ENST00000568593 1911 ntBASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 PHGDH-210ENST00000641115 1638 ntBASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 AC010947.1-201ENST00000623454 693 ntBASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
PHTF2Q8N3S3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHTF2Q8N3S3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms