Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZNF815P-204ENST00000434898 1737 ntBASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 AC073210.2-201ENST00000430369 194 ntBASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 CYP2T1P-201ENST00000432607 1285 ntBASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 AL161938.1-201ENST00000569833 2180 ntBASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 AC010980.2-201ENST00000587099 1412 ntBASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01561Q8N1V8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 NEFHP1-201ENST00000412845 2629 ntBASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 AC016769.1-201ENST00000409132 1010 ntBASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01561Q8N1V8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms