Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC5Q8IY18 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 UNC93B5-201ENST00000530315 699 ntBASIC24.12■■□□□ 1.45
SMC5Q8IY18 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMC5Q8IY18 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 AC008403.3-201ENST00000598924 454 ntBASIC24.12■■□□□ 1.45
SMC5Q8IY18 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC5Q8IY18 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMC5Q8IY18 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMC5Q8IY18 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SMC5Q8IY18 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
SMC5Q8IY18 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.11■■□□□ 1.45
SMC5Q8IY18 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
SMC5Q8IY18 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SMC5Q8IY18 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.11■■□□□ 1.45
SMC5Q8IY18 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMC5Q8IY18 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC24.11■■□□□ 1.45
SMC5Q8IY18 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SMC5Q8IY18 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SMC5Q8IY18 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC5Q8IY18 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC5Q8IY18 HLA-L-209ENST00000420110 1011 ntBASIC24.1■■□□□ 1.45
SMC5Q8IY18 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SMC5Q8IY18 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC5Q8IY18 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMC5Q8IY18 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.1■■□□□ 1.45
SMC5Q8IY18 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMC5Q8IY18 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMC5Q8IY18 POM121L13P-201ENST00000422362 380 ntBASIC24.09■■□□□ 1.45
SMC5Q8IY18 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMC5Q8IY18 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMC5Q8IY18 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMC5Q8IY18 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
SMC5Q8IY18 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMC5Q8IY18 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMC5Q8IY18 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMC5Q8IY18 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.08■■□□□ 1.45
SMC5Q8IY18 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.08■■□□□ 1.45
SMC5Q8IY18 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.08■■□□□ 1.45
SMC5Q8IY18 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 RHOD-202ENST00000532559 538 ntTSL 3 BASIC24.08■■□□□ 1.45
SMC5Q8IY18 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC24.08■■□□□ 1.45
SMC5Q8IY18 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMC5Q8IY18 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
SMC5Q8IY18 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SMC5Q8IY18 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
SMC5Q8IY18 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
SMC5Q8IY18 CROCCP3-202ENST00000420820 1947 ntBASIC24.08■■□□□ 1.44
SMC5Q8IY18 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
SMC5Q8IY18 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
SMC5Q8IY18 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SMC5Q8IY18 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms